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Computational
Genomics
BME 230, Winter 2008 |
Assignments
Every student is expected to turn in his/her own written material. There are going to be 2 programming assignments (PAs) and 3-4 written assignments (WAs). On programming excercises, you may work in pairs, but you must each turn in your own code. Please list your partner on any code or written material that you turn in.
PA1. Analysis of genome-wide data to discover functional elements in the human genome. Due Tue, Jan 22.
WA1. Identifying the 5' donor splice site in unaligned DNA sequences. Due Tue, Jan 29.
Abstracts for research proposals due Tue, Feb 5.
WA2. Hidden Markov Models . Due Tue, Feb 12.
PA2. Predicting cancer outcome from genomic features. Due Tue, Feb 26. Due Thu, Feb 28.
WA3. Evolutionary Tree Reconstruction. Due Tue, Mar 4. Due Thu, Mar 6.
PROJECTS. 10 minute oral presentations and 10 page paper. Due Fri, Mar 21.
