BME 140 - Bioinstrumentation Syllabus

TuTh 10:00 am - 11:45 am, Baskin Engineering 287

Fall 2009

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Course Description

This course will explore both theoretical and practical concepts of bioinstrumentation and its application in a variety of medical and scientific disciplines. Analytical experiments will be performed in the laboratory portion of the class. Topics covered include plasmid purification from bacteria, transformation of plasmid DNA to bacteria, Polymerase Chain Reaction (PCR), DNA sequencing with Pyrosequencing, recombinant protein production, protein purification with affinity chromatography and gel-electrophoresis of DNA and protein. This course highlights the basic laboratory skills that are essential for beginning-level employment in clinical, pharmaceutical and biotechnology laboratories. This course is well-suited for students in all majors and programs. In addition, the course involves a lab demo as well as literature workshop of selected articles, which will be performed in groups. Each group presents one article and will oppose two other groupsÂ’ articles. This project aims to teach critical reading, interpretation and comparison of the most advanced techniques and platforms in the fields of genomics proteomics and related nstrumentations. The project requires teamwork and planning, and participation as well as presence on the laboratory demos as well workshop days is compulsory.


Prerequisite Courses

course 5, or Biology 100, or Biochemistry and Molecular Biology 100A.

Contact Information

Instructor:

Professor Nader Pourmand
pourmand@soe.ucsc.edu

Teaching Assistant:
John Kim
hyjkim@soe.ucsc.edu


Office Hours

Office hours are available by appointment.


Grading

Grades will be based on:
Participation and Attendance: 15%
Lab Reports: 30%
Oral Presentation: 25%
Final Exam: 30%

Final Exam

12:00 - 3:00 pm, Monday, December 7th
The final exam is cumulative. All topics covered in the course may appear on the final.

Academic Integrity

Students are expected to follow the guidelines set by UCSC for academic integrity. More information can be found at the Official University Policy on Academic Integrity for Undergraduate Students.
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